Hello,
I have been trying to use the code, and couldn't apply it on the example.
it returned:
(Bullseye) [dorg@epitrans Code]$ perl parseBAM.pl --input file.bam --output output.matrix --cpu 4 --minCoverage 10 --removeDuplicates
perl: warning: Setting locale failed.
perl: warning: Please check that your locale settings:
LANGUAGE = (unset),
LC_ALL = (unset),
LANG = "C.UTF-8"
are supported and installed on your system.
perl: warning: Falling back to the standard locale ("C").
Missing right curly or square bracket at parseBAM.pl line 511, at end of line
syntax error at parseBAM.pl line 511, at EOF
Execution of parseBAM.pl aborted due to compilation errors.
Do you know what should be the problem.
Hello,
I have been trying to use the code, and couldn't apply it on the example.
it returned:
(Bullseye) [dorg@epitrans Code]$ perl parseBAM.pl --input file.bam --output output.matrix --cpu 4 --minCoverage 10 --removeDuplicates
perl: warning: Setting locale failed.
perl: warning: Please check that your locale settings:
LANGUAGE = (unset),
LC_ALL = (unset),
LANG = "C.UTF-8"
are supported and installed on your system.
perl: warning: Falling back to the standard locale ("C").
Missing right curly or square bracket at parseBAM.pl line 511, at end of line
syntax error at parseBAM.pl line 511, at EOF
Execution of parseBAM.pl aborted due to compilation errors.
Do you know what should be the problem.