A bioinformatics best-practice analysis pipeline for epitope prediction and annotation

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NetMHCIIpan MCP server for MHC Class II binding prediction

Python-based bioinformatics pipeline for comparative proteome analysis using overlapping peptide N-mers. Parses compressed FASTA proteomes, builds dataframe-centric peptide datasets, analyzes cross-species peptide occurrences, and generates statistical visualizations and reports with pandas and Biopython.

Computational pipeline for antigen-specific tolerogenic vaccine design—predicting MHC-II epitopes, scoring tolerance potential, and assembling candidate multi-epitope mRNA constructs (starting with ITP).

Structure-aware machine learning platform for PCV2 capsid epitope prediction using sequence, structural, and evolutionary features

AI-driven bioinformatics platform for viral sequence analysis, epitope discovery, and vaccine candidate design

NetMHCpan MCP server for MHC Class I binding prediction